Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.61■□□□□ 0.57
RAD23BP54727 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.61■□□□□ 0.57
RAD23BP54727 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAD23BP54727 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 AC148477.5-201ENST00000625164 1645 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 AC079776.2-201ENST00000641154 1609 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.61■□□□□ 0.57
RAD23BP54727 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RAD23BP54727 SPDYE21P-201ENST00000413323 827 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 SAPCD2P3-201ENST00000455031 850 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 EMBP1-201ENST00000458200 901 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 STK19B-204ENST00000512515 211 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.61■□□□□ 0.57
RAD23BP54727 MTDHP3-201ENST00000594186 672 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 AL355877.3-201ENST00000622820 899 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 AC073592.4-201ENST00000623827 446 ntBASIC18.61■□□□□ 0.57
RAD23BP54727 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.61■□□□□ 0.57
RAD23BP54727 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.61■□□□□ 0.57
RAD23BP54727 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.61■□□□□ 0.57
RAD23BP54727 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAD23BP54727 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.6■□□□□ 0.57
RAD23BP54727 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RAD23BP54727 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.6■□□□□ 0.57
RAD23BP54727 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 AC124067.4-201ENST00000519691 2379 ntBASIC18.6■□□□□ 0.57
RAD23BP54727 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
RAD23BP54727 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAD23BP54727 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.6■□□□□ 0.57
RAD23BP54727 FGFR3P6-201ENST00000457012 610 ntBASIC18.6■□□□□ 0.57
RAD23BP54727 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.6■□□□□ 0.57
RAD23BP54727 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RAD23BP54727 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.6■□□□□ 0.57
RAD23BP54727 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.6■□□□□ 0.57
RAD23BP54727 AC008608.2-201ENST00000606089 416 ntBASIC18.6■□□□□ 0.57
RAD23BP54727 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RAD23BP54727 AC046185.3-201ENST00000623228 1824 ntBASIC18.6■□□□□ 0.57
RAD23BP54727 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAD23BP54727 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAD23BP54727 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RAD23BP54727 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.59■□□□□ 0.57
RAD23BP54727 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RAD23BP54727 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 SIGLEC16-201ENST00000599858 1437 ntBASIC18.59■□□□□ 0.57
RAD23BP54727 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.59■□□□□ 0.57
RAD23BP54727 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.59■□□□□ 0.57
RAD23BP54727 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.59■□□□□ 0.57
RAD23BP54727 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.59■□□□□ 0.57
RAD23BP54727 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RAD23BP54727 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.59■□□□□ 0.57
RAD23BP54727 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.59■□□□□ 0.57
RAD23BP54727 RN7SL510P-201ENST00000581311 263 ntBASIC18.59■□□□□ 0.57
RAD23BP54727 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.59■□□□□ 0.57
RAD23BP54727 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.59■□□□□ 0.57
RAD23BP54727 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.59■□□□□ 0.57
RAD23BP54727 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAD23BP54727 AC141586.5-201ENST00000624546 2050 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms