Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CACNB3P54284 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 AC012317.2-201ENST00000623305 2251 ntBASIC20.52■□□□□ 0.88
CACNB3P54284 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CACNB3P54284 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
CACNB3P54284 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CACNB3P54284 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.51■□□□□ 0.87
CACNB3P54284 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.51■□□□□ 0.87
CACNB3P54284 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.51■□□□□ 0.87
CACNB3P54284 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.51■□□□□ 0.87
CACNB3P54284 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 AC004835.2-201ENST00000603762 682 ntBASIC20.51■□□□□ 0.87
CACNB3P54284 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CACNB3P54284 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.51■□□□□ 0.87
CACNB3P54284 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.51■□□□□ 0.87
CACNB3P54284 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CACNB3P54284 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNB3P54284 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.5■□□□□ 0.87
CACNB3P54284 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.5■□□□□ 0.87
CACNB3P54284 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.5■□□□□ 0.87
CACNB3P54284 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.5■□□□□ 0.87
CACNB3P54284 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CACNB3P54284 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.5■□□□□ 0.87
CACNB3P54284 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.5■□□□□ 0.87
CACNB3P54284 MIR770-201ENST00000390219 98 ntBASIC20.5■□□□□ 0.87
CACNB3P54284 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.5■□□□□ 0.87
CACNB3P54284 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CACNB3P54284 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CACNB3P54284 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.5■□□□□ 0.87
CACNB3P54284 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 AC109322.1-201ENST00000524499 1264 ntBASIC20.5■□□□□ 0.87
CACNB3P54284 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.5■□□□□ 0.87
CACNB3P54284 AC004449.1-201ENST00000564240 433 ntBASIC20.5■□□□□ 0.87
CACNB3P54284 MIR3197-201ENST00000582241 73 ntBASIC20.5■□□□□ 0.87
CACNB3P54284 REXO1L3P-201ENST00000622202 1288 ntBASIC20.5■□□□□ 0.87
CACNB3P54284 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CACNB3P54284 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CACNB3P54284 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.49■□□□□ 0.87
CACNB3P54284 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.49■□□□□ 0.87
CACNB3P54284 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.49■□□□□ 0.87
CACNB3P54284 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.49■□□□□ 0.87
CACNB3P54284 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.49■□□□□ 0.87
CACNB3P54284 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.49■□□□□ 0.87
CACNB3P54284 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.49■□□□□ 0.87
CACNB3P54284 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.49■□□□□ 0.87
CACNB3P54284 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.49■□□□□ 0.87
CACNB3P54284 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.49■□□□□ 0.87
CACNB3P54284 AC093512.1-201ENST00000617969 520 ntBASIC20.49■□□□□ 0.87
CACNB3P54284 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.49■□□□□ 0.87
CACNB3P54284 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CACNB3P54284 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 ABALON-201ENST00000629058 1903 ntBASIC20.49■□□□□ 0.87
CACNB3P54284 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.49■□□□□ 0.87
CACNB3P54284 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CACNB3P54284 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CACNB3P54284 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.48■□□□□ 0.87
CACNB3P54284 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CACNB3P54284 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CACNB3P54284 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms