Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 AC092364.2-202ENST00000597012 1073 ntBASIC18.24■□□□□ 0.51
CLCN4P51793 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCN4P51793 REXO1L3P-201ENST00000622202 1288 ntBASIC18.24■□□□□ 0.51
CLCN4P51793 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLCN4P51793 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 KRT18P55-202ENST00000578578 1546 ntBASIC18.23■□□□□ 0.51
CLCN4P51793 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN4P51793 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLCN4P51793 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.23■□□□□ 0.51
CLCN4P51793 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.23■□□□□ 0.51
CLCN4P51793 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN4P51793 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLCN4P51793 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
CLCN4P51793 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLCN4P51793 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCN4P51793 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLCN4P51793 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCN4P51793 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN4P51793 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLCN4P51793 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN4P51793 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CLCN4P51793 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN4P51793 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.22■□□□□ 0.51
CLCN4P51793 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.22■□□□□ 0.51
CLCN4P51793 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.22■□□□□ 0.51
CLCN4P51793 AC011467.4-201ENST00000594891 528 ntBASIC18.22■□□□□ 0.51
CLCN4P51793 ACTL9-202ENST00000612068 1252 ntBASIC18.22■□□□□ 0.51
CLCN4P51793 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLCN4P51793 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 AL121761.2-201ENST00000598007 1648 ntBASIC18.22■□□□□ 0.51
CLCN4P51793 AC092919.2-201ENST00000623631 1645 ntBASIC18.22■□□□□ 0.51
CLCN4P51793 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN4P51793 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLCN4P51793 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCN4P51793 AL135999.2-201ENST00000622438 1686 ntBASIC18.22■□□□□ 0.51
CLCN4P51793 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCN4P51793 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCN4P51793 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 AC006116.8-202ENST00000587620 1550 ntBASIC18.21■□□□□ 0.51
CLCN4P51793 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CLCN4P51793 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCN4P51793 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLCN4P51793 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN4P51793 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLCN4P51793 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms