Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.18■□□□□ 0.66
RFC5P40937 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RFC5P40937 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RFC5P40937 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.18■□□□□ 0.66
RFC5P40937 AL671883.3-201ENST00000603274 991 ntBASIC19.18■□□□□ 0.66
RFC5P40937 AC008667.4-201ENST00000607370 168 ntBASIC19.18■□□□□ 0.66
RFC5P40937 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RFC5P40937 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.18■□□□□ 0.66
RFC5P40937 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
RFC5P40937 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
RFC5P40937 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC5P40937 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RFC5P40937 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RFC5P40937 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 AP002414.1-201ENST00000391405 1147 ntBASIC19.17■□□□□ 0.66
RFC5P40937 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RFC5P40937 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.17■□□□□ 0.66
RFC5P40937 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 AC108751.1-201ENST00000490852 363 ntBASIC19.17■□□□□ 0.66
RFC5P40937 IGHV3-65-201ENST00000523210 341 ntBASIC19.17■□□□□ 0.66
RFC5P40937 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC5P40937 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.17■□□□□ 0.66
RFC5P40937 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.17■□□□□ 0.66
RFC5P40937 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RFC5P40937 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RFC5P40937 AL590787.1-201ENST00000568856 1315 ntBASIC19.17■□□□□ 0.66
RFC5P40937 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.17■□□□□ 0.66
RFC5P40937 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RFC5P40937 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RFC5P40937 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RFC5P40937 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 PTCHD3P3-201ENST00000403073 906 ntBASIC19.16■□□□□ 0.66
RFC5P40937 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.16■□□□□ 0.66
RFC5P40937 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.16■□□□□ 0.66
RFC5P40937 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFC5P40937 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFC5P40937 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFC5P40937 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.15■□□□□ 0.66
RFC5P40937 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFC5P40937 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms