Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CNGA1P29973 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.78■□□□□ 0.76
CNGA1P29973 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNGA1P29973 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.77■□□□□ 0.76
CNGA1P29973 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.77■□□□□ 0.76
CNGA1P29973 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.77■□□□□ 0.76
CNGA1P29973 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNGA1P29973 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CNGA1P29973 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.77■□□□□ 0.76
CNGA1P29973 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.77■□□□□ 0.76
CNGA1P29973 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CNGA1P29973 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.77■□□□□ 0.76
CNGA1P29973 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNGA1P29973 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CNGA1P29973 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.77■□□□□ 0.76
CNGA1P29973 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.77■□□□□ 0.76
CNGA1P29973 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.77■□□□□ 0.76
CNGA1P29973 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNGA1P29973 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNGA1P29973 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNGA1P29973 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNGA1P29973 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 AC025580.3-201ENST00000617932 1424 ntBASIC19.76■□□□□ 0.75
CNGA1P29973 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.76■□□□□ 0.75
CNGA1P29973 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CNGA1P29973 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.76■□□□□ 0.75
CNGA1P29973 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 PTCHD3P3-201ENST00000403073 906 ntBASIC19.76■□□□□ 0.75
CNGA1P29973 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 DUTP2-201ENST00000519164 463 ntBASIC19.76■□□□□ 0.75
CNGA1P29973 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.76■□□□□ 0.75
CNGA1P29973 AC096734.2-201ENST00000562054 433 ntBASIC19.76■□□□□ 0.75
CNGA1P29973 AC109462.3-201ENST00000573934 613 ntBASIC19.76■□□□□ 0.75
CNGA1P29973 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CNGA1P29973 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNGA1P29973 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.76■□□□□ 0.75
CNGA1P29973 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 HTR7P1-202ENST00000624664 4411 ntBASIC19.75■□□□□ 0.75
CNGA1P29973 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 AC097637.2-201ENST00000624096 1997 ntBASIC19.75■□□□□ 0.75
CNGA1P29973 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNGA1P29973 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.75■□□□□ 0.75
CNGA1P29973 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 AC074386.1-202ENST00000463561 864 ntBASIC19.75■□□□□ 0.75
CNGA1P29973 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.75■□□□□ 0.75
CNGA1P29973 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.75■□□□□ 0.75
CNGA1P29973 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.75■□□□□ 0.75
CNGA1P29973 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CNGA1P29973 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms