Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
EPHA3P29320 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EPHA3P29320 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EPHA3P29320 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EPHA3P29320 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EPHA3P29320 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.98■□□□□ 0.31
EPHA3P29320 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.98■□□□□ 0.31
EPHA3P29320 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EPHA3P29320 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.98■□□□□ 0.31
EPHA3P29320 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
EPHA3P29320 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EPHA3P29320 LINC02199-201ENST00000506655 2702 ntBASIC16.98■□□□□ 0.31
EPHA3P29320 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EPHA3P29320 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
EPHA3P29320 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 AC078925.2-201ENST00000624013 1973 ntBASIC16.97■□□□□ 0.31
EPHA3P29320 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.97■□□□□ 0.31
EPHA3P29320 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.97■□□□□ 0.31
EPHA3P29320 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 MMP23A-201ENST00000234610 1017 ntBASIC16.97■□□□□ 0.31
EPHA3P29320 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.97■□□□□ 0.31
EPHA3P29320 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.97■□□□□ 0.31
EPHA3P29320 RASA4DP-201ENST00000460726 1199 ntBASIC16.97■□□□□ 0.31
EPHA3P29320 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.97■□□□□ 0.31
EPHA3P29320 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.97■□□□□ 0.31
EPHA3P29320 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.97■□□□□ 0.31
EPHA3P29320 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.97■□□□□ 0.31
EPHA3P29320 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EPHA3P29320 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.97■□□□□ 0.31
EPHA3P29320 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.97■□□□□ 0.31
EPHA3P29320 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EPHA3P29320 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.96■□□□□ 0.31
EPHA3P29320 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
EPHA3P29320 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EPHA3P29320 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EPHA3P29320 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
EPHA3P29320 KRT18P48-201ENST00000434763 852 ntBASIC16.96■□□□□ 0.31
EPHA3P29320 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.96■□□□□ 0.31
EPHA3P29320 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHA3P29320 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHA3P29320 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHA3P29320 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.96■□□□□ 0.31
EPHA3P29320 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.96■□□□□ 0.31
EPHA3P29320 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 AC141257.4-201ENST00000634557 245 ntBASIC16.96■□□□□ 0.31
EPHA3P29320 AC136944.6-201ENST00000634818 245 ntBASIC16.96■□□□□ 0.31
EPHA3P29320 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHA3P29320 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHA3P29320 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
EPHA3P29320 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EPHA3P29320 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EPHA3P29320 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
EPHA3P29320 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EPHA3P29320 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
EPHA3P29320 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.96■□□□□ 0.3
EPHA3P29320 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.96■□□□□ 0.3
EPHA3P29320 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.96■□□□□ 0.3
EPHA3P29320 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.96■□□□□ 0.3
EPHA3P29320 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHA3P29320 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EPHA3P29320 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHA3P29320 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHA3P29320 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHA3P29320 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms