Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 AP005901.3-202ENST00000581653 237 ntBASIC14.98□□□□□ -0.01
CCL1P22362 NTF6B-201ENST00000591913 560 ntBASIC14.98□□□□□ -0.01
CCL1P22362 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCL1P22362 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCL1P22362 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 AC005332.1-201ENST00000577698 1310 ntBASIC14.97□□□□□ -0.01
CCL1P22362 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.97□□□□□ -0.01
CCL1P22362 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CCL1P22362 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.97□□□□□ -0.01
CCL1P22362 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.97□□□□□ -0.01
CCL1P22362 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.97□□□□□ -0.01
CCL1P22362 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCL1P22362 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCL1P22362 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 AC016734.2-201ENST00000624325 1377 ntBASIC14.97□□□□□ -0.01
CCL1P22362 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CCL1P22362 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 FLJ38576-201ENST00000623820 2459 ntBASIC14.97□□□□□ -0.01
CCL1P22362 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCL1P22362 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL1P22362 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCL1P22362 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCL1P22362 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 KLF4P1-201ENST00000412782 1185 ntBASIC14.96□□□□□ -0.01
CCL1P22362 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
CCL1P22362 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL1P22362 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL1P22362 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL1P22362 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CCL1P22362 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL1P22362 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL1P22362 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL1P22362 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CCL1P22362 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCL1P22362 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms