Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RAB3BP20337 FAM197Y4-202ENST00000622692 608 ntBASIC15.3■□□□□ 0.04
RAB3BP20337 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAB3BP20337 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB3BP20337 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB3BP20337 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 AC078925.2-201ENST00000624013 1973 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB3BP20337 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB3BP20337 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RAB3BP20337 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.29■□□□□ 0.04
RAB3BP20337 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 CCR12P-201ENST00000446203 998 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 KRT18P6-201ENST00000555540 1265 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 AL139327.4-201ENST00000612362 153 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 REXO1L10P-201ENST00000615707 1290 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 REXO1L12P-201ENST00000622156 912 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RAB3BP20337 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB3BP20337 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB3BP20337 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
RAB3BP20337 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB3BP20337 AC093525.9-201ENST00000624961 1746 ntBASIC15.29■□□□□ 0.04
RAB3BP20337 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB3BP20337 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RAB3BP20337 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3BP20337 AC092338.2-201ENST00000568827 1415 ntBASIC15.28■□□□□ 0.04
RAB3BP20337 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.28■□□□□ 0.04
RAB3BP20337 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RAB3BP20337 AC092053.1-201ENST00000605787 1936 ntBASIC15.28■□□□□ 0.04
RAB3BP20337 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.28■□□□□ 0.04
RAB3BP20337 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3BP20337 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB3BP20337 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3BP20337 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3BP20337 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RAB3BP20337 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
RAB3BP20337 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RAB3BP20337 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RAB3BP20337 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 CYP2T1P-202ENST00000641596 2535 ntBASIC15.27■□□□□ 0.04
RAB3BP20337 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RAB3BP20337 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB3BP20337 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
RAB3BP20337 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB3BP20337 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.27■□□□□ 0.04
RAB3BP20337 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB3BP20337 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms