Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 AP005117.1-201ENST00000584346 1413 ntBASIC18.71■□□□□ 0.59
CD58P19256 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CD58P19256 AL138688.1-201ENST00000624851 1594 ntBASIC18.71■□□□□ 0.59
CD58P19256 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CD58P19256 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CD58P19256 CROCCP2-202ENST00000412962 2773 ntBASIC18.7■□□□□ 0.58
CD58P19256 AC012313.1-201ENST00000593393 3059 ntBASIC18.7■□□□□ 0.58
CD58P19256 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CD58P19256 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.7■□□□□ 0.58
CD58P19256 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 EMBP1-201ENST00000458200 901 ntBASIC18.7■□□□□ 0.58
CD58P19256 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 KRT126P-201ENST00000549467 1181 ntBASIC18.7■□□□□ 0.58
CD58P19256 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CD58P19256 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD58P19256 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CD58P19256 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.7■□□□□ 0.58
CD58P19256 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.7■□□□□ 0.58
CD58P19256 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CD58P19256 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CD58P19256 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CD58P19256 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CD58P19256 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.69■□□□□ 0.58
CD58P19256 AC003669.1-201ENST00000334569 611 ntBASIC18.69■□□□□ 0.58
CD58P19256 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 AC106795.1-205ENST00000512851 1056 ntBASIC18.69■□□□□ 0.58
CD58P19256 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 MTDHP3-201ENST00000594186 672 ntBASIC18.69■□□□□ 0.58
CD58P19256 AC008608.2-201ENST00000606089 416 ntBASIC18.69■□□□□ 0.58
CD58P19256 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CD58P19256 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 AC046185.3-201ENST00000623228 1824 ntBASIC18.69■□□□□ 0.58
CD58P19256 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CD58P19256 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CD58P19256 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD58P19256 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CD58P19256 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 AC004817.3-201ENST00000602957 2129 ntBASIC18.68■□□□□ 0.58
CD58P19256 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD58P19256 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms