Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 AC078925.2-201ENST00000624013 1973 ntBASIC17.5■□□□□ 0.39
KRT4P19013 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.5■□□□□ 0.39
KRT4P19013 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
KRT4P19013 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT4P19013 AP000523.1-201ENST00000398242 1049 ntBASIC17.5■□□□□ 0.39
KRT4P19013 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.5■□□□□ 0.39
KRT4P19013 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.5■□□□□ 0.39
KRT4P19013 AL355075.4-201ENST00000554988 638 ntBASIC17.5■□□□□ 0.39
KRT4P19013 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 AC004263.2-201ENST00000617183 678 ntBASIC17.5■□□□□ 0.39
KRT4P19013 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT4P19013 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT4P19013 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT4P19013 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT4P19013 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
KRT4P19013 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.49■□□□□ 0.39
KRT4P19013 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT4P19013 HMGA1P5-201ENST00000412453 271 ntBASIC17.49■□□□□ 0.39
KRT4P19013 TSPY12P-201ENST00000421279 868 ntBASIC17.49■□□□□ 0.39
KRT4P19013 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 ECEL1P2-202ENST00000465689 757 ntBASIC17.49■□□□□ 0.39
KRT4P19013 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT4P19013 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
KRT4P19013 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT4P19013 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT4P19013 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 AC010947.1-201ENST00000623454 693 ntBASIC17.49■□□□□ 0.39
KRT4P19013 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT4P19013 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT4P19013 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KRT4P19013 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT4P19013 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
KRT4P19013 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
KRT4P19013 KRT8P9-201ENST00000558927 1449 ntBASIC17.48■□□□□ 0.39
KRT4P19013 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
KRT4P19013 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT4P19013 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT4P19013 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT4P19013 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT4P19013 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 MIR718-201ENST00000390190 70 ntBASIC17.48■□□□□ 0.39
KRT4P19013 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT4P19013 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT4P19013 NAPSB-206ENST00000562112 1266 ntBASIC17.48■□□□□ 0.39
KRT4P19013 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT4P19013 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT4P19013 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms