Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.79□□□□□ -0.68
PDE6GP18545 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.79□□□□□ -0.68
PDE6GP18545 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
PDE6GP18545 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
PDE6GP18545 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
PDE6GP18545 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 AC092384.3-202ENST00000564646 2873 ntBASIC10.79□□□□□ -0.68
PDE6GP18545 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
PDE6GP18545 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 AMT-233ENST00000636522 1620 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC10.78□□□□□ -0.68
PDE6GP18545 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PDE6GP18545 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 CYP2T1P-201ENST00000432607 1285 ntBASIC10.78□□□□□ -0.68
PDE6GP18545 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC10.78□□□□□ -0.68
PDE6GP18545 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PDE6GP18545 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PDE6GP18545 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC10.78□□□□□ -0.68
PDE6GP18545 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
PDE6GP18545 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
PDE6GP18545 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
PDE6GP18545 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
PDE6GP18545 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC10.77□□□□□ -0.68
PDE6GP18545 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 AC006538.1-201ENST00000567905 1585 ntBASIC10.77□□□□□ -0.68
PDE6GP18545 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC10.77□□□□□ -0.68
PDE6GP18545 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
PDE6GP18545 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.77□□□□□ -0.68
PDE6GP18545 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 AL136379.1-201ENST00000623471 2642 ntBASIC10.77□□□□□ -0.68
PDE6GP18545 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
PDE6GP18545 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
PDE6GP18545 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms