Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.49■□□□□ 0.23
NCK1P16333 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.49■□□□□ 0.23
NCK1P16333 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 AC024563.2-201ENST00000603282 481 ntBASIC16.49■□□□□ 0.23
NCK1P16333 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
NCK1P16333 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.49■□□□□ 0.23
NCK1P16333 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NCK1P16333 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NCK1P16333 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
NCK1P16333 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NCK1P16333 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
NCK1P16333 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.49■□□□□ 0.23
NCK1P16333 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.48■□□□□ 0.23
NCK1P16333 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
NCK1P16333 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NCK1P16333 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.48■□□□□ 0.23
NCK1P16333 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
NCK1P16333 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NCK1P16333 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 AC112698.1-201ENST00000510299 916 ntBASIC16.48■□□□□ 0.23
NCK1P16333 EGLN1P1-201ENST00000531623 762 ntBASIC16.48■□□□□ 0.23
NCK1P16333 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
NCK1P16333 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.48■□□□□ 0.23
NCK1P16333 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 PCDHA1-201ENST00000378133 2726 ntBASIC16.48■□□□□ 0.23
NCK1P16333 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.48■□□□□ 0.23
NCK1P16333 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 CYP2D8P-201ENST00000433633 1490 ntBASIC16.48■□□□□ 0.23
NCK1P16333 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCK1P16333 AC093525.9-201ENST00000624961 1746 ntBASIC16.48■□□□□ 0.23
NCK1P16333 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.47■□□□□ 0.23
NCK1P16333 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.47■□□□□ 0.23
NCK1P16333 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NCK1P16333 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 AC092068.3-201ENST00000587894 2016 ntBASIC16.47■□□□□ 0.23
NCK1P16333 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.47■□□□□ 0.23
NCK1P16333 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
NCK1P16333 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.47■□□□□ 0.23
NCK1P16333 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.47■□□□□ 0.23
NCK1P16333 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.47■□□□□ 0.23
NCK1P16333 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 AC004263.2-201ENST00000617183 678 ntBASIC16.47■□□□□ 0.23
NCK1P16333 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.47■□□□□ 0.23
NCK1P16333 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.47■□□□□ 0.23
NCK1P16333 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.47■□□□□ 0.23
NCK1P16333 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCK1P16333 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms