Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SRFP11831 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.47■□□□□ 0.39
SRFP11831 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.47■□□□□ 0.39
SRFP11831 CR383656.12-201ENST00000549567 513 ntBASIC17.47■□□□□ 0.39
SRFP11831 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFP11831 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.47■□□□□ 0.39
SRFP11831 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SRFP11831 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.47■□□□□ 0.39
SRFP11831 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFP11831 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 AC073130.3-201ENST00000624389 2278 ntBASIC17.47■□□□□ 0.39
SRFP11831 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFP11831 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFP11831 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SRFP11831 AP000997.3-201ENST00000623333 2250 ntBASIC17.46■□□□□ 0.39
SRFP11831 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.46■□□□□ 0.39
SRFP11831 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SRFP11831 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SRFP11831 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SRFP11831 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.46■□□□□ 0.39
SRFP11831 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.46■□□□□ 0.39
SRFP11831 AC109635.5-201ENST00000533593 962 ntBASIC17.46■□□□□ 0.39
SRFP11831 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.46■□□□□ 0.39
SRFP11831 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SRFP11831 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 KRT18P55-202ENST00000578578 1546 ntBASIC17.46■□□□□ 0.39
SRFP11831 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFP11831 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SRFP11831 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRFP11831 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SRFP11831 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRFP11831 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.45■□□□□ 0.38
SRFP11831 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.45■□□□□ 0.38
SRFP11831 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.45■□□□□ 0.38
SRFP11831 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.45■□□□□ 0.38
SRFP11831 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SRFP11831 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.45■□□□□ 0.38
SRFP11831 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.45■□□□□ 0.38
SRFP11831 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 AC012569.1-201ENST00000591191 1524 ntBASIC17.45■□□□□ 0.38
SRFP11831 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRFP11831 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.45■□□□□ 0.38
SRFP11831 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.44■□□□□ 0.38
SRFP11831 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.44■□□□□ 0.38
SRFP11831 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.44■□□□□ 0.38
SRFP11831 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.44■□□□□ 0.38
SRFP11831 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 REXO1L9P-201ENST00000604264 2108 ntBASIC17.44■□□□□ 0.38
SRFP11831 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.44■□□□□ 0.38
SRFP11831 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SRFP11831 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SRFP11831 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.44■□□□□ 0.38
SRFP11831 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.44■□□□□ 0.38
SRFP11831 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.44■□□□□ 0.38
SRFP11831 ALG1L8P-201ENST00000533887 760 ntBASIC17.44■□□□□ 0.38
SRFP11831 AL008721.1-201ENST00000609964 604 ntBASIC17.44■□□□□ 0.38
SRFP11831 AL139327.4-201ENST00000612362 153 ntBASIC17.44■□□□□ 0.38
SRFP11831 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.44■□□□□ 0.38
SRFP11831 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SRFP11831 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms