Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD28P10747 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.62□□□□□ -0.23
CD28P10747 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 RPS8P6-201ENST00000426177 609 ntBASIC13.62□□□□□ -0.23
CD28P10747 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CD28P10747 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.62□□□□□ -0.23
CD28P10747 DNAJB3-201ENST00000446806 729 ntBASIC13.62□□□□□ -0.23
CD28P10747 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.62□□□□□ -0.23
CD28P10747 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 STK19B-204ENST00000512515 211 ntBASIC13.62□□□□□ -0.23
CD28P10747 IGHV3-52-201ENST00000519770 353 ntBASIC13.62□□□□□ -0.23
CD28P10747 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
CD28P10747 AC002347.1-201ENST00000569543 541 ntBASIC13.62□□□□□ -0.23
CD28P10747 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.62□□□□□ -0.23
CD28P10747 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.62□□□□□ -0.23
CD28P10747 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.62□□□□□ -0.23
CD28P10747 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 AP000997.3-201ENST00000623333 2250 ntBASIC13.62□□□□□ -0.23
CD28P10747 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CD28P10747 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CD28P10747 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.62□□□□□ -0.23
CD28P10747 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CD28P10747 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CD28P10747 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD28P10747 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CD28P10747 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.61□□□□□ -0.23
CD28P10747 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.61□□□□□ -0.23
CD28P10747 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 MIR4751-201ENST00000578027 74 ntBASIC13.61□□□□□ -0.23
CD28P10747 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
CD28P10747 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CD28P10747 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CD28P10747 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD28P10747 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms