Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPRFP10586 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPRFP10586 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPRFP10586 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPRFP10586 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.76■□□□□ 0.75
PTPRFP10586 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPRFP10586 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPRFP10586 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPRFP10586 MRPS18AP1-201ENST00000414458 589 ntBASIC19.76■□□□□ 0.75
PTPRFP10586 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPRFP10586 FAM207CP-201ENST00000443486 507 ntBASIC19.76■□□□□ 0.75
PTPRFP10586 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.76■□□□□ 0.75
PTPRFP10586 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPRFP10586 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.76■□□□□ 0.75
PTPRFP10586 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTPRFP10586 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPRFP10586 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPRFP10586 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
PTPRFP10586 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
PTPRFP10586 AC008677.1-201ENST00000519230 1561 ntBASIC19.75■□□□□ 0.75
PTPRFP10586 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
PTPRFP10586 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PTPRFP10586 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPRFP10586 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 RNU1-129P-201ENST00000384064 167 ntBASIC19.75■□□□□ 0.75
PTPRFP10586 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPRFP10586 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPRFP10586 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTPRFP10586 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTPRFP10586 U1.21-201ENST00000580816 167 ntBASIC19.75■□□□□ 0.75
PTPRFP10586 MIR6080-201ENST00000617359 66 ntBASIC19.75■□□□□ 0.75
PTPRFP10586 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPRFP10586 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PTPRFP10586 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPRFP10586 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPRFP10586 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPRFP10586 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTPRFP10586 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
PTPRFP10586 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPRFP10586 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPRFP10586 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 AC125807.1-201ENST00000483097 614 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 AC069120.2-201ENST00000524091 540 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
PTPRFP10586 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPRFP10586 AL161645.1-201ENST00000622716 1255 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 AL035252.4-201ENST00000624174 288 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPRFP10586 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPRFP10586 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPRFP10586 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTPRFP10586 SLC22A20-204ENST00000530038 1673 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPRFP10586 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPRFP10586 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 TREML5P-201ENST00000421694 576 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 AC005237.2-201ENST00000434368 219 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTPRFP10586 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 AL512356.2-201ENST00000546955 174 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 AC008761.3-201ENST00000624803 892 ntBASIC19.74■□□□□ 0.75
PTPRFP10586 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPRFP10586 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PTPRFP10586 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPRFP10586 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPRFP10586 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPRFP10586 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPRFP10586 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPRFP10586 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPRFP10586 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PTPRFP10586 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPRFP10586 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPRFP10586 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPRFP10586 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPRFP10586 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms