Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ERBB2P04626 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERBB2P04626 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERBB2P04626 AC093525.9-201ENST00000624961 1746 ntBASIC18.29■□□□□ 0.52
ERBB2P04626 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ERBB2P04626 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
ERBB2P04626 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ERBB2P04626 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.28■□□□□ 0.52
ERBB2P04626 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.28■□□□□ 0.52
ERBB2P04626 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 SIGLEC30P-201ENST00000455569 941 ntBASIC18.28■□□□□ 0.52
ERBB2P04626 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 AF238378.1-201ENST00000526806 358 ntBASIC18.28■□□□□ 0.52
ERBB2P04626 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.28■□□□□ 0.52
ERBB2P04626 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 NKAPP1-205ENST00000585790 367 ntBASIC18.28■□□□□ 0.52
ERBB2P04626 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ERBB2P04626 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ERBB2P04626 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.28■□□□□ 0.52
ERBB2P04626 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.28■□□□□ 0.52
ERBB2P04626 AC090340.1-201ENST00000620778 4980 ntBASIC18.28■□□□□ 0.52
ERBB2P04626 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ERBB2P04626 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ERBB2P04626 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ERBB2P04626 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ERBB2P04626 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.27■□□□□ 0.52
ERBB2P04626 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.27■□□□□ 0.52
ERBB2P04626 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ERBB2P04626 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ERBB2P04626 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.27■□□□□ 0.52
ERBB2P04626 SAPCD2P3-201ENST00000455031 850 ntBASIC18.27■□□□□ 0.52
ERBB2P04626 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.27■□□□□ 0.52
ERBB2P04626 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.27■□□□□ 0.52
ERBB2P04626 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.27■□□□□ 0.52
ERBB2P04626 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ERBB2P04626 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERBB2P04626 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ERBB2P04626 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
ERBB2P04626 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ERBB2P04626 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.27■□□□□ 0.51
ERBB2P04626 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ERBB2P04626 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.26■□□□□ 0.51
ERBB2P04626 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.26■□□□□ 0.51
ERBB2P04626 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.26■□□□□ 0.51
ERBB2P04626 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ERBB2P04626 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ERBB2P04626 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 SART3-203ENST00000546611 1184 ntBASIC18.26■□□□□ 0.51
ERBB2P04626 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ERBB2P04626 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.26■□□□□ 0.51
ERBB2P04626 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.26■□□□□ 0.51
ERBB2P04626 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERBB2P04626 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
ERBB2P04626 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms