Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CD74P04233 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.66□□□□□ -0.06
CD74P04233 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.66□□□□□ -0.06
CD74P04233 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CD74P04233 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.65□□□□□ -0.06
CD74P04233 AC112698.1-201ENST00000510299 916 ntBASIC14.65□□□□□ -0.06
CD74P04233 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CD74P04233 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 KRT18P6-201ENST00000555540 1265 ntBASIC14.65□□□□□ -0.06
CD74P04233 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.65□□□□□ -0.06
CD74P04233 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.65□□□□□ -0.06
CD74P04233 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.65□□□□□ -0.06
CD74P04233 AC009154.2-201ENST00000621177 724 ntBASIC14.65□□□□□ -0.06
CD74P04233 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 AC116562.4-202ENST00000641738 218 ntBASIC14.65□□□□□ -0.06
CD74P04233 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.65□□□□□ -0.06
CD74P04233 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CD74P04233 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CD74P04233 AC092850.2-201ENST00000623821 2697 ntBASIC14.65□□□□□ -0.06
CD74P04233 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.65□□□□□ -0.06
CD74P04233 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CD74P04233 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CD74P04233 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.65□□□□□ -0.06
CD74P04233 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 AC105917.1-201ENST00000506637 2539 ntBASIC14.64□□□□□ -0.07
CD74P04233 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.64□□□□□ -0.07
CD74P04233 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 AC068418.2-201ENST00000577309 3703 ntBASIC14.64□□□□□ -0.07
CD74P04233 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD74P04233 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 AL662844.4-201ENST00000606367 2838 ntBASIC14.64□□□□□ -0.07
CD74P04233 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CD74P04233 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.64□□□□□ -0.07
CD74P04233 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.64□□□□□ -0.07
CD74P04233 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.64□□□□□ -0.07
CD74P04233 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.64□□□□□ -0.07
CD74P04233 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.64□□□□□ -0.07
CD74P04233 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD74P04233 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.64□□□□□ -0.07
CD74P04233 AC010653.2-201ENST00000623505 997 ntBASIC14.64□□□□□ -0.07
CD74P04233 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.64□□□□□ -0.07
CD74P04233 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.64□□□□□ -0.07
CD74P04233 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.64□□□□□ -0.07
CD74P04233 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD74P04233 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
CD74P04233 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD74P04233 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.63□□□□□ -0.07
CD74P04233 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD74P04233 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms