Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.24■□□□□ 0.83
CDKL5O76039 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDKL5O76039 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.24■□□□□ 0.83
CDKL5O76039 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 HCG4P8-203ENST00000443049 980 ntBASIC20.24■□□□□ 0.83
CDKL5O76039 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.24■□□□□ 0.83
CDKL5O76039 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDKL5O76039 AL591684.3-201ENST00000605187 298 ntBASIC20.24■□□□□ 0.83
CDKL5O76039 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDKL5O76039 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDKL5O76039 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.24■□□□□ 0.83
CDKL5O76039 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL5O76039 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDKL5O76039 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL5O76039 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL5O76039 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.23■□□□□ 0.83
CDKL5O76039 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL5O76039 ABCD1P5-201ENST00000445663 754 ntBASIC20.23■□□□□ 0.83
CDKL5O76039 NUS1P1-201ENST00000446295 882 ntBASIC20.23■□□□□ 0.83
CDKL5O76039 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.23■□□□□ 0.83
CDKL5O76039 MIR3652-201ENST00000579335 131 ntBASIC20.23■□□□□ 0.83
CDKL5O76039 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDKL5O76039 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL5O76039 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CDKL5O76039 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL5O76039 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDKL5O76039 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.23■□□□□ 0.83
CDKL5O76039 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDKL5O76039 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKL5O76039 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKL5O76039 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKL5O76039 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDKL5O76039 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CDKL5O76039 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.22■□□□□ 0.83
CDKL5O76039 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.22■□□□□ 0.83
CDKL5O76039 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDKL5O76039 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 AL135999.2-201ENST00000622438 1686 ntBASIC20.22■□□□□ 0.83
CDKL5O76039 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDKL5O76039 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
CDKL5O76039 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDKL5O76039 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL5O76039 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDKL5O76039 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL5O76039 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL5O76039 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDKL5O76039 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CDKL5O76039 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.21■□□□□ 0.83
CDKL5O76039 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms