Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.94■□□□□ 0.46
COCHO43405 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.94■□□□□ 0.46
COCHO43405 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COCHO43405 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.94■□□□□ 0.46
COCHO43405 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COCHO43405 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.94■□□□□ 0.46
COCHO43405 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COCHO43405 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COCHO43405 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COCHO43405 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COCHO43405 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.94■□□□□ 0.46
COCHO43405 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COCHO43405 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.93■□□□□ 0.46
COCHO43405 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.93■□□□□ 0.46
COCHO43405 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 AC004832.2-201ENST00000426397 482 ntBASIC17.93■□□□□ 0.46
COCHO43405 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.93■□□□□ 0.46
COCHO43405 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.93■□□□□ 0.46
COCHO43405 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.93■□□□□ 0.46
COCHO43405 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.93■□□□□ 0.46
COCHO43405 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
COCHO43405 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COCHO43405 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COCHO43405 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.92■□□□□ 0.46
COCHO43405 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.92■□□□□ 0.46
COCHO43405 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.92■□□□□ 0.46
COCHO43405 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 AC010327.4-202ENST00000591484 748 ntBASIC17.92■□□□□ 0.46
COCHO43405 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COCHO43405 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.92■□□□□ 0.46
COCHO43405 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COCHO43405 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.91■□□□□ 0.46
COCHO43405 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.91■□□□□ 0.46
COCHO43405 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.91■□□□□ 0.46
COCHO43405 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COCHO43405 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 AC018470.1-201ENST00000624790 3129 ntBASIC17.91■□□□□ 0.46
COCHO43405 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COCHO43405 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 UPF3AP3-201ENST00000420996 769 ntBASIC17.91■□□□□ 0.46
COCHO43405 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.91■□□□□ 0.46
COCHO43405 GPX1P2-201ENST00000429271 606 ntBASIC17.91■□□□□ 0.46
COCHO43405 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.91■□□□□ 0.46
COCHO43405 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
COCHO43405 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.91■□□□□ 0.46
COCHO43405 AC092865.6-201ENST00000642101 219 ntBASIC17.91■□□□□ 0.46
COCHO43405 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.91■□□□□ 0.46
COCHO43405 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COCHO43405 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COCHO43405 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COCHO43405 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.9■□□□□ 0.46
COCHO43405 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms