Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SRGAP3O43295 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP3O43295 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP3O43295 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.59■■□□□ 1.05
SRGAP3O43295 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.59■■□□□ 1.05
SRGAP3O43295 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.59■■□□□ 1.05
SRGAP3O43295 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
SRGAP3O43295 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.59■■□□□ 1.05
SRGAP3O43295 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.59■■□□□ 1.05
SRGAP3O43295 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.59■■□□□ 1.05
SRGAP3O43295 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SRGAP3O43295 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.59■■□□□ 1.05
SRGAP3O43295 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SRGAP3O43295 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SRGAP3O43295 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SRGAP3O43295 AC141586.5-201ENST00000624546 2050 ntBASIC21.59■■□□□ 1.05
SRGAP3O43295 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP3O43295 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SRGAP3O43295 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.58■■□□□ 1.05
SRGAP3O43295 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SRGAP3O43295 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SRGAP3O43295 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 RPS2P28-201ENST00000314255 741 ntBASIC21.58■■□□□ 1.05
SRGAP3O43295 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.58■■□□□ 1.05
SRGAP3O43295 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.58■■□□□ 1.05
SRGAP3O43295 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.58■■□□□ 1.05
SRGAP3O43295 AC079776.4-201ENST00000511039 504 ntBASIC21.58■■□□□ 1.05
SRGAP3O43295 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SRGAP3O43295 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.58■■□□□ 1.05
SRGAP3O43295 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.58■■□□□ 1.05
SRGAP3O43295 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.58■■□□□ 1.05
SRGAP3O43295 AC004706.3-202ENST00000621574 984 ntBASIC21.58■■□□□ 1.05
SRGAP3O43295 AC008735.5-201ENST00000623544 497 ntBASIC21.58■■□□□ 1.05
SRGAP3O43295 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP3O43295 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRGAP3O43295 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.58■■□□□ 1.04
SRGAP3O43295 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.58■■□□□ 1.04
SRGAP3O43295 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.57■■□□□ 1.04
SRGAP3O43295 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.57■■□□□ 1.04
SRGAP3O43295 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.57■■□□□ 1.04
SRGAP3O43295 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.57■■□□□ 1.04
SRGAP3O43295 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.57■■□□□ 1.04
SRGAP3O43295 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SRGAP3O43295 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SRGAP3O43295 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP3O43295 AC139713.2-201ENST00000641328 2723 ntBASIC21.57■■□□□ 1.04
SRGAP3O43295 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SRGAP3O43295 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.56■■□□□ 1.04
SRGAP3O43295 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SRGAP3O43295 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.56■■□□□ 1.04
SRGAP3O43295 ACTG1P4-201ENST00000425123 1122 ntBASIC21.56■■□□□ 1.04
SRGAP3O43295 KRT18P27-201ENST00000427733 1299 ntBASIC21.56■■□□□ 1.04
SRGAP3O43295 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.56■■□□□ 1.04
SRGAP3O43295 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.56■■□□□ 1.04
SRGAP3O43295 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.56■■□□□ 1.04
SRGAP3O43295 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.56■■□□□ 1.04
SRGAP3O43295 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.56■■□□□ 1.04
SRGAP3O43295 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.56■■□□□ 1.04
SRGAP3O43295 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.56■■□□□ 1.04
SRGAP3O43295 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.56■■□□□ 1.04
SRGAP3O43295 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SRGAP3O43295 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 AC243591.1-201ENST00000452967 1364 ntBASIC21.56■■□□□ 1.04
SRGAP3O43295 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.56■■□□□ 1.04
SRGAP3O43295 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.56■■□□□ 1.04
SRGAP3O43295 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRGAP3O43295 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms