Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A1O14983 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 PI4KAP1-204ENST00000612579 1703 ntBASIC19.88■□□□□ 0.77
ATP2A1O14983 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A1O14983 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ATP2A1O14983 PMS2P2-201ENST00000425039 1128 ntBASIC19.88■□□□□ 0.77
ATP2A1O14983 HTR5BP-201ENST00000430851 1154 ntBASIC19.88■□□□□ 0.77
ATP2A1O14983 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP2A1O14983 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A1O14983 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP2A1O14983 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A1O14983 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
ATP2A1O14983 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 KRT19P2-202ENST00000557173 1012 ntBASIC19.88■□□□□ 0.77
ATP2A1O14983 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 MIR4469-201ENST00000583919 79 ntBASIC19.88■□□□□ 0.77
ATP2A1O14983 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
ATP2A1O14983 AL139327.4-201ENST00000612362 153 ntBASIC19.88■□□□□ 0.77
ATP2A1O14983 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A1O14983 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP2A1O14983 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A1O14983 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A1O14983 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A1O14983 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP2A1O14983 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A1O14983 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A1O14983 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP2A1O14983 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.87■□□□□ 0.77
ATP2A1O14983 AC254562.1-201ENST00000417586 456 ntBASIC19.87■□□□□ 0.77
ATP2A1O14983 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.87■□□□□ 0.77
ATP2A1O14983 PAWRP1-201ENST00000451083 565 ntBASIC19.87■□□□□ 0.77
ATP2A1O14983 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A1O14983 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A1O14983 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A1O14983 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A1O14983 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A1O14983 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A1O14983 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP2A1O14983 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A1O14983 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A1O14983 AC104581.1-202ENST00000635932 2618 ntBASIC19.87■□□□□ 0.77
ATP2A1O14983 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP2A1O14983 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP2A1O14983 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ATP2A1O14983 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
ATP2A1O14983 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP2A1O14983 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATP2A1O14983 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
ATP2A1O14983 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATP2A1O14983 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.86■□□□□ 0.77
ATP2A1O14983 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATP2A1O14983 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATP2A1O14983 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATP2A1O14983 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms