Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 IGHV3OR16-16-201ENST00000563644 343 ntBASIC27.76■■■□□ 2.03
CHD1O14646 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD1O14646 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC27.75■■■□□ 2.03
CHD1O14646 AC008735.3-201ENST00000596646 500 ntBASIC27.75■■■□□ 2.03
CHD1O14646 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD1O14646 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC27.75■■■□□ 2.03
CHD1O14646 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC27.75■■■□□ 2.03
CHD1O14646 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
CHD1O14646 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
CHD1O14646 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CHD1O14646 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD1O14646 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD1O14646 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC27.75■■■□□ 2.03
CHD1O14646 AL138918.1-201ENST00000568306 659 ntBASIC27.75■■■□□ 2.03
CHD1O14646 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC27.75■■■□□ 2.03
CHD1O14646 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD1O14646 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHD1O14646 AMT-250ENST00000637682 1823 ntTSL 5 BASIC27.75■■■□□ 2.03
CHD1O14646 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC27.74■■■□□ 2.03
CHD1O14646 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC27.74■■■□□ 2.03
CHD1O14646 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC27.74■■■□□ 2.03
CHD1O14646 CENPM-206ENST00000407253 818 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 GNAQP1-201ENST00000444815 1067 ntBASIC27.74■■■□□ 2.03
CHD1O14646 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC27.74■■■□□ 2.03
CHD1O14646 PARP8-206ENST00000503665 572 ntTSL 4 BASIC27.74■■■□□ 2.03
CHD1O14646 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC27.74■■■□□ 2.03
CHD1O14646 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC27.74■■■□□ 2.03
CHD1O14646 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHD1O14646 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
CHD1O14646 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 HIST1H2BPS3-201ENST00000419683 341 ntBASIC27.73■■■□□ 2.03
CHD1O14646 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC27.73■■■□□ 2.03
CHD1O14646 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC27.73■■■□□ 2.03
CHD1O14646 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 CETN4P-206ENST00000642099 2168 ntBASIC27.73■■■□□ 2.03
CHD1O14646 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC27.73■■■□□ 2.03
CHD1O14646 AL020996.1-203ENST00000536896 2307 ntBASIC27.73■■■□□ 2.03
CHD1O14646 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC27.73■■■□□ 2.03
CHD1O14646 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CHD1O14646 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 RASL12-203ENST00000434605 982 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 AC099548.2-209ENST00000480264 625 ntBASIC27.72■■■□□ 2.03
CHD1O14646 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 AC135586.1-201ENST00000539323 574 ntBASIC27.72■■■□□ 2.03
CHD1O14646 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC27.72■■■□□ 2.03
CHD1O14646 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC27.72■■■□□ 2.03
CHD1O14646 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC27.72■■■□□ 2.03
CHD1O14646 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC27.72■■■□□ 2.03
CHD1O14646 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC27.72■■■□□ 2.03
CHD1O14646 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
CHD1O14646 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHD1O14646 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC27.72■■■□□ 2.03
CHD1O14646 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CHD1O14646 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHD1O14646 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.71■■■□□ 2.03
CHD1O14646 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms