Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 MYCLP1-201ENST00000372451 1075 ntBASIC12.29□□□□□ -0.44
LINC01546A6NGU7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 AP003097.1-201ENST00000530657 1135 ntBASIC12.29□□□□□ -0.44
LINC01546A6NGU7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 SLC25A1P4-201ENST00000567977 778 ntBASIC12.29□□□□□ -0.44
LINC01546A6NGU7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 AL645728.1-201ENST00000366221 2101 ntBASIC12.29□□□□□ -0.44
LINC01546A6NGU7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01546A6NGU7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 HLA-J-202ENST00000469281 1241 ntBASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AF186192.3-201ENST00000583427 947 ntBASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC01546A6NGU7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms