Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.55■□□□□ 0.24
LRIT2A6NDA9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 AF238378.1-201ENST00000526806 358 ntBASIC16.55■□□□□ 0.24
LRIT2A6NDA9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.55■□□□□ 0.24
LRIT2A6NDA9 AL356309.3-201ENST00000624132 1934 ntBASIC16.55■□□□□ 0.24
LRIT2A6NDA9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.54■□□□□ 0.24
LRIT2A6NDA9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 FGFR3P6-201ENST00000457012 610 ntBASIC16.54■□□□□ 0.24
LRIT2A6NDA9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 NKAPP1-205ENST00000585790 367 ntBASIC16.54■□□□□ 0.24
LRIT2A6NDA9 AL139288.1-201ENST00000623748 933 ntBASIC16.54■□□□□ 0.24
LRIT2A6NDA9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.54■□□□□ 0.24
LRIT2A6NDA9 AC093525.9-201ENST00000624961 1746 ntBASIC16.53■□□□□ 0.24
LRIT2A6NDA9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 SLC25A1P3-201ENST00000395415 828 ntBASIC16.53■□□□□ 0.24
LRIT2A6NDA9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 BX005266.1-201ENST00000473402 457 ntBASIC16.53■□□□□ 0.24
LRIT2A6NDA9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.53■□□□□ 0.24
LRIT2A6NDA9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms