Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 AC007274.1-201ENST00000439805 662 ntBASIC20.07■□□□□ 0.8
SSC5DA1L4H1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 KRT8P23-201ENST00000560090 1207 ntBASIC20.07■□□□□ 0.8
SSC5DA1L4H1 AC005412.3-201ENST00000580309 715 ntBASIC20.07■□□□□ 0.8
SSC5DA1L4H1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.07■□□□□ 0.8
SSC5DA1L4H1 AC093503.3-201ENST00000624917 2352 ntBASIC20.06■□□□□ 0.8
SSC5DA1L4H1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.06■□□□□ 0.8
SSC5DA1L4H1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSC5DA1L4H1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 AC097493.3-201ENST00000509725 367 ntBASIC20.05■□□□□ 0.8
SSC5DA1L4H1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 LINC00304-203ENST00000565008 1864 ntBASIC20.05■□□□□ 0.8
SSC5DA1L4H1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSC5DA1L4H1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.04■□□□□ 0.8
SSC5DA1L4H1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 SERBP1P5-201ENST00000510079 1181 ntBASIC20.04■□□□□ 0.8
SSC5DA1L4H1 AC069120.2-201ENST00000524091 540 ntBASIC20.04■□□□□ 0.8
SSC5DA1L4H1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 AC004890.2-204ENST00000481968 304 ntBASIC20.04■□□□□ 0.8
SSC5DA1L4H1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 ALG1L8P-201ENST00000533887 760 ntBASIC20.04■□□□□ 0.8
SSC5DA1L4H1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSC5DA1L4H1 AP000842.3-202ENST00000569238 1080 ntBASIC20.04■□□□□ 0.8
SSC5DA1L4H1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms