Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 AC078925.2-201ENST00000624013 1973 ntBASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
TCRBV9S1A1TA0A576 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 SPDYE13P-201ENST00000445314 798 ntBASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRBV9S1A1TA0A576 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 AC006011.2-201ENST00000621313 1158 ntBASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRBV9S1A1TA0A576 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 AC005521.1-201ENST00000393351 872 ntBASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.52■□□□□ 0.4
TCRBV9S1A1TA0A576 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV9S1A1TA0A576 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRBV9S1A1TA0A576 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms