Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.88■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC003669.1-201ENST00000334569 611 ntBASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC132008.2-207ENST00000454517 770 ntBASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CROCCP1-201ENST00000426910 5675 ntBASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC132938.5-201ENST00000624980 1813 ntBASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MRPL3P1-201ENST00000400109 1033 ntBASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 KLF4P1-201ENST00000412782 1185 ntBASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 STK19B-204ENST00000512515 211 ntBASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 LTB4R2-202ENST00000528054 3092 ntBASIC15.86■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 AC016396.2-201ENST00000562575 1417 ntBASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TNFSF12-TNFSF13A0A0A6YY99 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms