Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAD54BQ9Y620 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 FAM220CP-201ENST00000395253 831 ntBASIC18.11■□□□□ 0.49
RAD54BQ9Y620 RPS2P1-201ENST00000434010 821 ntBASIC18.11■□□□□ 0.49
RAD54BQ9Y620 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 POLD2P1-201ENST00000511220 997 ntBASIC18.11■□□□□ 0.49
RAD54BQ9Y620 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 AC139887.3-201ENST00000568585 713 ntBASIC18.11■□□□□ 0.49
RAD54BQ9Y620 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 AL023806.1-201ENST00000603994 1649 ntBASIC18.11■□□□□ 0.49
RAD54BQ9Y620 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAD54BQ9Y620 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 SIRPAP1-201ENST00000448467 1770 ntBASIC18.1■□□□□ 0.49
RAD54BQ9Y620 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 MIR940-201ENST00000401276 94 ntBASIC18.1■□□□□ 0.49
RAD54BQ9Y620 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 AL139327.4-201ENST00000612362 153 ntBASIC18.1■□□□□ 0.49
RAD54BQ9Y620 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 AC116407.3-201ENST00000623905 1129 ntBASIC18.1■□□□□ 0.49
RAD54BQ9Y620 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAD54BQ9Y620 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 RPL13AP23-201ENST00000480739 586 ntBASIC18.09■□□□□ 0.49
RAD54BQ9Y620 IGHV3-52-201ENST00000519770 353 ntBASIC18.09■□□□□ 0.49
RAD54BQ9Y620 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 AC106730.1-201ENST00000566722 1090 ntBASIC18.09■□□□□ 0.49
RAD54BQ9Y620 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAD54BQ9Y620 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms