Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 FAM220CP-201ENST00000395253 831 ntBASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 MIR1233-2-201ENST00000408138 82 ntBASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 MIR1233-1-201ENST00000408722 82 ntBASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 OR7E14P-202ENST00000530490 1290 ntBASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 AC027601.4-201ENST00000611259 610 ntBASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGA3Q9Y5H0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 AL499627.1-201ENST00000569373 2188 ntBASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 AC025062.2-201ENST00000605477 670 ntBASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 FAM197Y3-203ENST00000618346 717 ntBASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 AP000867.4-201ENST00000641616 219 ntBASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 GNAS-203ENST00000306120 1878 ntBASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGA3Q9Y5H0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 AC104109.2-201ENST00000602919 1418 ntBASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 AL591424.1-201ENST00000442569 1213 ntBASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 PGAM5P1-201ENST00000518923 814 ntBASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 AC008735.5-201ENST00000623544 497 ntBASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms