Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AL589182.2-201ENST00000619332 1049 ntBASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AC134043.2-201ENST00000624206 2238 ntBASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 AP006288.1-201ENST00000446065 395 ntBASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA9Q9Y5G4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC132938.6-201ENST00000623828 1655 ntBASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC211486.1-202ENST00000416371 468 ntBASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 MCCD1P2-201ENST00000423228 335 ntBASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 DNAJB3-202ENST00000449667 1266 ntBASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC211476.1-201ENST00000503899 468 ntBASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGA9Q9Y5G4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA9Q9Y5G4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms