Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 MRPL3P1-201ENST00000400109 1033 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AC093909.1-201ENST00000504731 1122 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AP001005.1-201ENST00000571755 1248 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 BNIP3P18-201ENST00000593976 575 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AC009053.2-201ENST00000563701 2365 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 HLA-A-201ENST00000376802 1334 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AC022898.2-201ENST00000616822 1312 ntBASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 AF238378.1-201ENST00000526806 358 ntBASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 AC009154.2-201ENST00000621177 724 ntBASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 AC133963.1-201ENST00000504166 1679 ntBASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 AL138688.1-201ENST00000624851 1594 ntBASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NCKIPSDQ9NZQ3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AC091607.1-201ENST00000490318 1060 ntBASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AC009533.2-201ENST00000543664 586 ntBASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 AC117500.6-201ENST00000624871 588 ntBASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NCKIPSDQ9NZQ3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms