Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 BNIP3P18-201ENST00000593976 575 ntBASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 AL138831.2-201ENST00000606564 490 ntBASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.75■□□□□ 0.27
NECTIN3Q9NQS3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 PP12613-201ENST00000424958 2230 ntBASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 AL121761.2-201ENST00000598007 1648 ntBASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.74■□□□□ 0.27
NECTIN3Q9NQS3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms