Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC52A3Q9NQ40 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 IGHV3-52-201ENST00000519770 353 ntBASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC52A3Q9NQ40 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 LINC02199-201ENST00000506655 2702 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 CYP2T1P-202ENST00000641596 2535 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 KRT8P10-201ENST00000450021 1447 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 AC117947.1-201ENST00000427448 529 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 RN7SL606P-201ENST00000472779 293 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 STK25P1-201ENST00000585406 838 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 Z83836.1-201ENST00000624605 1642 ntBASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC52A3Q9NQ40 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC52A3Q9NQ40 AL845331.1-201ENST00000424978 1190 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms