Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.93■□□□□ 0.62
NLRC4Q9NPP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NLRC4Q9NPP4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NLRC4Q9NPP4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 AL845331.1-201ENST00000424978 1190 ntBASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 LINC01238-205ENST00000567549 1107 ntBASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 AC019129.2-201ENST00000609837 1235 ntBASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
NLRC4Q9NPP4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC011498.5-201ENST00000592027 486 ntBASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC005336.2-201ENST00000593183 939 ntBASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 IGHV3-41-201ENST00000613121 348 ntBASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.91■□□□□ 0.62
NLRC4Q9NPP4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 AC046185.3-201ENST00000623228 1824 ntBASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.9■□□□□ 0.62
NLRC4Q9NPP4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms