Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 AC073592.4-201ENST00000623827 446 ntBASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 LYSMD4-203ENST00000378904 2122 ntBASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC4Q9HBW1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC4Q9HBW1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC4Q9HBW1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC4Q9HBW1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.39■□□□□ 0.54
LRRC4Q9HBW1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRC4Q9HBW1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 FAM197Y8-203ENST00000450145 560 ntBASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 AL160237.2-201ENST00000556165 472 ntBASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 AC046185.3-201ENST00000623228 1824 ntBASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.39■□□□□ 0.53
LRRC4Q9HBW1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC073648.2-201ENST00000510116 352 ntBASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC104692.2-201ENST00000603054 253 ntBASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 TP73-AS1-207ENST00000624167 988 ntBASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AL022326.1-202ENST00000641533 845 ntBASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 OR6D1P-203ENST00000641209 4860 ntBASIC18.38■□□□□ 0.53
LRRC4Q9HBW1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC4Q9HBW1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRRC4Q9HBW1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC4Q9HBW1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC4Q9HBW1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC4Q9HBW1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC4Q9HBW1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms