Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHACTR1Q9C0D0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PHACTR1Q9C0D0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PHACTR1Q9C0D0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.71■□□□□ 0.42
PHACTR1Q9C0D0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PHACTR1Q9C0D0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PHACTR1Q9C0D0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PHACTR1Q9C0D0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PHACTR1Q9C0D0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 AC122714.2-201ENST00000502787 707 ntBASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 AC092053.1-201ENST00000605787 1936 ntBASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 AL603756.1-201ENST00000606511 2163 ntBASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PHACTR1Q9C0D0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 AL596257.1-201ENST00000641463 2694 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 AC073912.3-201ENST00000624414 853 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PHACTR1Q9C0D0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PHACTR1Q9C0D0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms