Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 AC148477.5-201ENST00000625164 1645 ntBASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2OQ9C0C9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AL031598.1-201ENST00000561511 1773 ntBASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 PTCHD3P3-201ENST00000403073 906 ntBASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AC245100.3-201ENST00000441281 285 ntBASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AC112191.1-201ENST00000523689 701 ntBASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 TUBB3P1-201ENST00000405796 1332 ntBASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2OQ9C0C9 AC020916.1-201ENST00000587762 1774 ntBASIC19.14■□□□□ 0.66
UBE2OQ9C0C9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 AL353593.2-201ENST00000602529 1483 ntBASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2OQ9C0C9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 KLF2P3-201ENST00000451977 1087 ntBASIC19.13■□□□□ 0.65
UBE2OQ9C0C9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms