Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KRT8P26-201ENST00000534154 1276 ntBASIC16.08■□□□□ 0.16
TRIM2Q9C040 AC011840.4-201ENST00000578471 627 ntBASIC16.08■□□□□ 0.16
TRIM2Q9C040 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.08■□□□□ 0.16
TRIM2Q9C040 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRIM2Q9C040 AP001094.4-201ENST00000579008 2176 ntBASIC16.08■□□□□ 0.16
TRIM2Q9C040 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.08■□□□□ 0.16
TRIM2Q9C040 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRIM2Q9C040 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRIM2Q9C040 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 IGHV3-52-201ENST00000519770 353 ntBASIC16.07■□□□□ 0.16
TRIM2Q9C040 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 AC125634.1-201ENST00000438758 1403 ntBASIC16.07■□□□□ 0.16
TRIM2Q9C040 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRIM2Q9C040 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRIM2Q9C040 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.06■□□□□ 0.16
TRIM2Q9C040 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 AC007967.3-201ENST00000434308 558 ntBASIC16.06■□□□□ 0.16
TRIM2Q9C040 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 HCG4P8-203ENST00000443049 980 ntBASIC16.06■□□□□ 0.16
TRIM2Q9C040 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.06■□□□□ 0.16
TRIM2Q9C040 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRIM2Q9C040 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRIM2Q9C040 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRIM2Q9C040 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.05■□□□□ 0.16
TRIM2Q9C040 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRIM2Q9C040 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRIM2Q9C040 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM2Q9C040 AC122714.2-201ENST00000502787 707 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms