Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 AC079140.1-201ENST00000508039 487 ntBASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 AC069262.1-201ENST00000539058 672 ntBASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 SPDYE9P-201ENST00000570642 692 ntBASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 SPDYE10P-202ENST00000612005 668 ntBASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 SPDYE8P-202ENST00000612377 668 ntBASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.02■□□□□ 0.96
RTFDC1Q9BY42 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RTFDC1Q9BY42 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 FAM58DP-201ENST00000428076 619 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 GPS2P2-201ENST00000430745 888 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 AC005237.2-201ENST00000434368 219 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 AL592309.1-201ENST00000443127 649 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 CNN2P2-201ENST00000443536 909 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 CNN2P3-201ENST00000450201 906 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 RN7SL589P-201ENST00000481268 310 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 AL136317.3-201ENST00000618497 906 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 AP001059.3-201ENST00000619053 235 ntBASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RTFDC1Q9BY42 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 TFAMP1-201ENST00000412727 736 ntBASIC21■□□□□ 0.95
RTFDC1Q9BY42 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 AC055876.3-201ENST00000431496 288 ntBASIC21■□□□□ 0.95
RTFDC1Q9BY42 AC190387.1-201ENST00000551683 408 ntBASIC21■□□□□ 0.95
RTFDC1Q9BY42 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 AC138649.4-201ENST00000612222 287 ntBASIC21■□□□□ 0.95
RTFDC1Q9BY42 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21■□□□□ 0.95
RTFDC1Q9BY42 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RTFDC1Q9BY42 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 PMS2P4-201ENST00000412466 1052 ntBASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.99■□□□□ 0.95
RTFDC1Q9BY42 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms