Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BPIFA3Q9BQP9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 AC122714.2-201ENST00000502787 707 ntBASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 AC145285.6-201ENST00000604632 637 ntBASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.27■□□□□ 0.68
BPIFA3Q9BQP9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 AL049757.1-201ENST00000616842 1596 ntBASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.27■□□□□ 0.67
BPIFA3Q9BQP9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 AC138932.1-201ENST00000534164 6830 ntBASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 AC005332.3-201ENST00000589904 676 ntBASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BPIFA3Q9BQP9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 SLC25A3P1-201ENST00000443844 931 ntBASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BPIFA3Q9BQP9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms