Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 SCARNA2-201ENST00000458748 420 ntBASIC14.49□□□□□ -0.09
GAFA1Q96PS6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 AL691432.3-201ENST00000621860 400 ntBASIC14.49□□□□□ -0.09
GAFA1Q96PS6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GAFA1Q96PS6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AL645608.8-201ENST00000606034 2086 ntBASIC14.48□□□□□ -0.09
GAFA1Q96PS6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AC004870.1-201ENST00000315132 882 ntBASIC14.48□□□□□ -0.09
GAFA1Q96PS6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AL022326.1-202ENST00000641533 845 ntBASIC14.48□□□□□ -0.09
GAFA1Q96PS6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.48□□□□□ -0.09
GAFA1Q96PS6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GAFA1Q96PS6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.47□□□□□ -0.09
GAFA1Q96PS6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 AL121912.1-201ENST00000603683 238 ntBASIC14.47□□□□□ -0.09
GAFA1Q96PS6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms