Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 AC009102.3-201ENST00000623118 1491 ntBASIC13.24□□□□□ -0.29
AP1S3Q96PC3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 AC133681.1-201ENST00000465482 601 ntBASIC13.24□□□□□ -0.29
AP1S3Q96PC3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 RNA5SP413-201ENST00000516373 109 ntBASIC13.24□□□□□ -0.29
AP1S3Q96PC3 AC233263.1-201ENST00000578059 224 ntBASIC13.24□□□□□ -0.29
AP1S3Q96PC3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
AP1S3Q96PC3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 PCDHA1-201ENST00000378133 2726 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 AC092850.2-201ENST00000623821 2697 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MIR149-201ENST00000384879 89 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 RPS2P4-201ENST00000476944 856 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 AC104771.1-201ENST00000603335 964 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 AC006116.8-202ENST00000587620 1550 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 KRT18P55-202ENST00000578578 1546 ntBASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
AP1S3Q96PC3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.22□□□□□ -0.29
AP1S3Q96PC3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms