Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 AC079781.3-201ENST00000449110 356 ntBASIC20.25■□□□□ 0.83
PGBD1Q96JS3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 AC097374.2-201ENST00000618617 1306 ntBASIC20.25■□□□□ 0.83
PGBD1Q96JS3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PGBD1Q96JS3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 AP001269.4-201ENST00000609611 512 ntBASIC20.24■□□□□ 0.83
PGBD1Q96JS3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.24■□□□□ 0.83
PGBD1Q96JS3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 AF238378.1-201ENST00000526806 358 ntBASIC20.23■□□□□ 0.83
PGBD1Q96JS3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PGBD1Q96JS3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 LYSMD4-203ENST00000378904 2122 ntBASIC20.22■□□□□ 0.83
PGBD1Q96JS3 FAM220CP-201ENST00000395253 831 ntBASIC20.22■□□□□ 0.83
PGBD1Q96JS3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PGBD1Q96JS3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms