Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 AC136632.2-201ENST00000512891 861 ntBASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 AL356488.2-201ENST00000602755 427 ntBASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ECHDC3Q96DC8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 AL590627.1-203ENST00000421194 1026 ntBASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 AC098831.1-202ENST00000438821 336 ntBASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 AC092910.1-201ENST00000482027 1129 ntBASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 AL590787.1-201ENST00000568856 1315 ntBASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ECHDC3Q96DC8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 SLC25A1P3-201ENST00000395415 828 ntBASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 AC117500.6-201ENST00000624871 588 ntBASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 PGM5P2-202ENST00000637225 1043 ntBASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 AC026471.1-201ENST00000564629 3026 ntBASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ECHDC3Q96DC8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AC145285.3-201ENST00000564603 959 ntBASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AC120114.3-201ENST00000611923 658 ntBASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 MIR1199-201ENST00000621445 119 ntBASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 AL805961.1-202ENST00000641562 540 ntBASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms