Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP6V0A1Q93050 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 AC112482.1-201ENST00000492080 688 ntBASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 AC064836.3-201ENST00000607928 673 ntBASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 AC004706.3-202ENST00000621574 984 ntBASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP6V0A1Q93050 AC046185.3-201ENST00000623228 1824 ntBASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 AC023274.1-201ENST00000418278 595 ntBASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 AC002347.1-201ENST00000569543 541 ntBASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 AL355312.1-201ENST00000407115 2176 ntBASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 AC133963.1-201ENST00000504166 1679 ntBASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
ATP6V0A1Q93050 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 AC004832.2-201ENST00000426397 482 ntBASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ATP6V0A1Q93050 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms