Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LINC01311-201ENST00000565162 1445 ntBASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 SPDYE15P-201ENST00000424157 909 ntBASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 SEC1P-202ENST00000473944 940 ntBASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 FAM86EP-206ENST00000510506 987 ntBASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 AP000550.4-202ENST00000639755 178 ntBASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40AQ8WXH6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 PCED1CP-201ENST00000419887 785 ntBASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 ZNF444P1-201ENST00000559497 298 ntBASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 DOC2GP-204ENST00000639052 2548 ntBASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAB40AQ8WXH6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 AL136038.3-201ENST00000561909 1096 ntBASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 HYMAI.1-201ENST00000620949 238 ntBASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40AQ8WXH6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms