Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.35■□□□□ 0.37
CKAP2Q8WWK9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 ITM2C-210ENST00000620962 501 ntBASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CKAP2Q8WWK9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKAP2Q8WWK9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 AC092338.2-201ENST00000568827 1415 ntBASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 AP005242.2-201ENST00000580065 1175 ntBASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKAP2Q8WWK9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKAP2Q8WWK9 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms