Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AC011467.2-201ENST00000598425 242 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 CROCCP2-202ENST00000412962 2773 ntBASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TTC9CQ8N5M4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 LINC00265-3P-201ENST00000447588 903 ntBASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 MINOS1P3-201ENST00000457048 203 ntBASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 MIR3180-1-201ENST00000580374 94 ntBASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 MIR3180-3-201ENST00000584616 94 ntBASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TTC9CQ8N5M4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 AL049757.1-201ENST00000616842 1596 ntBASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 IGHV3-47-201ENST00000425060 335 ntBASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 ATP5G2P1-201ENST00000433580 426 ntBASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 NPAP1P7-201ENST00000613027 823 ntBASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TTC9CQ8N5M4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms