Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ATP6V0CP3-201ENST00000417255 467 ntBASIC27.04■■□□□ 1.92
VPS8Q8N3P4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 REXO1L3P-201ENST00000622202 1288 ntBASIC27.04■■□□□ 1.92
VPS8Q8N3P4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
VPS8Q8N3P4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 COX10-202ENST00000429152 875 ntTSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 AC040169.1-201ENST00000565382 521 ntBASIC27.03■■□□□ 1.92
VPS8Q8N3P4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
VPS8Q8N3P4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
VPS8Q8N3P4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
VPS8Q8N3P4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.92
VPS8Q8N3P4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
VPS8Q8N3P4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 RHOQP3-201ENST00000437982 621 ntBASIC27.01■■□□□ 1.91
VPS8Q8N3P4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 RHBDF1P1-201ENST00000427504 1941 ntBASIC27.01■■□□□ 1.91
VPS8Q8N3P4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 PC-214ENST00000628663 1470 ntTSL 5 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC27.01■■□□□ 1.91
VPS8Q8N3P4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 AC004832.2-201ENST00000426397 482 ntBASIC27■■□□□ 1.91
VPS8Q8N3P4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC27■■□□□ 1.91
VPS8Q8N3P4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27■■□□□ 1.91
VPS8Q8N3P4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27■■□□□ 1.91
VPS8Q8N3P4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC27■■□□□ 1.91
VPS8Q8N3P4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
VPS8Q8N3P4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 FRMD8P1-201ENST00000440433 1524 ntBASIC27■■□□□ 1.91
VPS8Q8N3P4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
VPS8Q8N3P4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC27■■□□□ 1.91
VPS8Q8N3P4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 MIR940-201ENST00000401276 94 ntBASIC26.99■■□□□ 1.91
VPS8Q8N3P4 BX842568.4-201ENST00000421222 227 ntBASIC26.99■■□□□ 1.91
VPS8Q8N3P4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.99■■□□□ 1.91
VPS8Q8N3P4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms