Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC141257.4-201ENST00000634557 245 ntBASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC136944.6-201ENST00000634818 245 ntBASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LINC01561Q8N1V8 AC092850.2-201ENST00000623821 2697 ntBASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 CYP2D8P-201ENST00000433633 1490 ntBASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 AC060834.1-201ENST00000443027 2032 ntBASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 GCSHP2-201ENST00000560971 527 ntBASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 AP006294.2-201ENST00000641667 209 ntBASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 AC106886.4-201ENST00000623557 2502 ntBASIC11.73□□□□□ -0.53
LINC01561Q8N1V8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 AC105020.1-201ENST00000435356 2205 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 AGGF1P2-201ENST00000426656 2106 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 C8orf49-201ENST00000525043 1968 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms